Commands

  RunAllPathsLG PRE=/assemblies DATA=datadir RUN=rundir SUBDIR=attempt1

References

Manual

ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/AllPaths-LG_Manual.pdf

Website

http://software.broadinstitute.org/allpaths-lg/blog/

Download

http://software.broadinstitute.org/allpaths-lg/blog/?page_id=12