Kmer-counting Commands

dsk  -file A1.fa,A2.fa,A3.fa  -kmer-size 31

# or
dsk -file list_reads
# The file list_reads lists the names fastq files, 
# one line per file

References

Manual

http://minia.genouest.org/dsk/

Github

https://github.com/GATB/dsk

Paper

https://academic.oup.com/bioinformatics/article/29/5/652/253092