Assembly algorithms

 spades.py --pe1-1 ../share/spades/test_dataset/ecoli_1K_1.fq.gz --pe1-2 ../share/spades/test_dataset/ecoli_1K_2.fq.gz -o spades_test

References

http://spades.bioinf.spbau.ru/release3.9.0/manual.html

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3342519/